Sigenae Public
Sign in or register

Redundancy Tool

This tool based on a non filtered blast tries to find redundant DNA sequences between the two sets pasted hereunder in multi FASTA format.

Two sequences are said redundant if they share at least a segment (called window) which fulfills the following constraints:

  • length of the window is at least X bases length, or Y% of the total length of the query sequence

  • the window defined like this must be conserved between the two sequences with at least Z% of identity.

Parameters are thus X or Y, and Z.

NB. Sequences with same names are skipped from output.

Redundancy Results